PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON32222.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 289aa    MW: 32688.3 Da    PI: 9.5735
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON32222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.76.7e-11261071097
                 HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 vl  + l +p kf + +g  ++ sk++++  + g +W++ l   k++++ +l +GW eF k  +L+    +vF+++g+s+f  +  +f
  PON32222.1  26 VLDADKLQIPEKFERICG--ETLSKDVVVGLPCGSEWKMGL--VKRDKKLWLLEGWTEFSKHYNLERACLLVFRYEGKSKF--TAVIF 107
                 56668899*****76667..46999****************..99999999999**********************99999..55555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MACSCGKGAT QQPVFSATTP HFFRTVLDAD KLQIPEKFER ICGETLSKDV VVGLPCGSEW  60
KMGLVKRDKK LWLLEGWTEF SKHYNLERAC LLVFRYEGKS KFTAVIFDQS AVEVDYPYTP  120
VQFHEPDIGD QEDQESKGTQ TEESASVEIL EDFSFSLENQ SPLPSSSRLK GRKTSNSGDE  180
MKGDGDKSIT QRQRKCDVLK MMKPLCPGEK DKALKMTTGF KSKNPFFKVV RQPSYVMSSR  240
LKIPSHFARK YLKDNSGRVN LKVSGGKTWS VTFTFSVYGK NRTAKFYNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-29B3 family protein