PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON32169.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 243aa MW: 26899.9 Da PI: 8.217 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.7 | 1.5e-19 | 42 | 87 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+teEd +l ++v+q+G+++W++I+r++ gR++k+c++rw + PON32169.1 42 KGPWSTEEDRILTRLVEQYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 87 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 54.1 | 3.6e-17 | 96 | 138 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ PON32169.1 96 PFSAAEDETILAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 138 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MEQMNHNRCS STTTSSSDSS SSESSGNDIK VPRSGTKPER IKGPWSTEED RILTRLVEQY 60 GPRNWSLISR YIKGRSGKSC RLRWCNQLSP SVEHRPFSAA EDETILAAHA RYGNRWATIA 120 RLLPGRTDNA VKNHWNSTLK RRVREQLMGM EEMDGSACRT AAFGGGPAGS VPCGINNDSN 180 INNGSPPLSL EDDPLTALTL APPGIGGETV EGRRTESFPA GFWDVMRDVI AREVREYVNS 240 EFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 8e-58 | MYB family protein |