PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH06477.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | HB-other | ||||||||
Protein Properties | Length: 238aa MW: 26547 Da PI: 5.8319 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 21.8 | 3.3e-07 | 179 | 210 | 23 | 54 |
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp+ ee++ L +gL+ +q+ +WF N+R + PNH06477.1 179 PYPDDEEKRLLGGATGLNPTQIANWFINQRKR 210 8*****************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MLRLNAAGVR SRSVSDELDA ARDVAVWELG EVRRQARQEG FQLEPDPAFD EFMETYISLC 60 NAYHGELSTL FKEADGLMLD FESRLASALQ RGGDGRPHKT GAAASAGFPS TSGGEFVTFG 120 GDDVSSDAPQ LRSVLLKRKY AEDMQKLQEE FSQRKKSCKL PDSATAALKD WWAANLIWPY 180 PDDEEKRLLG GATGLNPTQI ANWFINQRKR HWLKLFPGKP PENKETAEVM LRKLGIIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23380.2 | 2e-27 | TALE family protein |