PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA67204.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Trihelix
Protein Properties Length: 388aa    MW: 43468.6 Da    PI: 7.6571
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA67204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix81.61e-2592177187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW++qe+l+L+e+r +++ r+r+  +k+ lW+ev++ m +e g++rs  +C+ek++nl k+ykk++eg+ +r  ++ +++++f+qlea
  PKA67204.1  92 RWPRQETLTLLEVRARLDPRFREPGQKASLWDEVARIMaEEYGYQRSGRKCREKLDNLYKYYKKTREGRAGR--QDGKHYRFFRQLEA 177
                 8*************************************7788****************************98..55667*******85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
METEDQYYHV LPELRQLMLL GGKAPLIPAA DHLYSMLAVA ADNGPAAPAP FPATFLLPER  60
QSLHPPPLAG SNNASSSVSN GGAGGLYNSS QRWPRQETLT LLEVRARLDP RFREPGQKAS  120
LWDEVARIMA EEYGYQRSGR KCREKLDNLY KYYKKTREGR AGRQDGKHYR FFRQLEALYG  180
PAGGKAGSFS HHPKRESSGS LAAAARSNGP SSFVHNLEGL CFSTSGESSD EQEYDERERG  240
VKSRISKLVD GQMKRLVEIQ EAWFEKMVRS LERMEEERWR REERWRREEA ARQERERLIA  300
ARERAWSEAR EAALLKALEK MIRGGSGGVL SAPSGESEAM ECDGDGGGLM KGTVEKEVRR  360
RNDESFNVVS EINGSWGLGS SLHEGDGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.11e-54Trihelix family protein