PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA67180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | NF-YB | ||||||||
Protein Properties | Length: 163aa MW: 18440.8 Da PI: 9.0572 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 39.6 | 1.3e-12 | 63 | 127 | 31 | 95 |
NF-YB 31 aketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 a e fi ++++ a+d c++ kr+tin++d++ al ++ f ++++pl++ l+++r ++ PKA67180.1 63 ALLAFSESTRIFIHYLSATANDICKESKRQTINAEDVFKALDEMEFPEFIQPLRASLQEFRRKNT 127 55566778888*************************************************98665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MVKGDASDGT TVAPATQAMV EELPRTIVRR VVKEKLSHLS SSSRKKSKSD DGGNEEMILH 60 RDALLAFSES TRIFIHYLSA TANDICKESK RQTINAEDVF KALDEMEFPE FIQPLRASLQ 120 EFRRKNTMKK SGAKAKETKK RKSQDHLPAQ DEKDQESYHG ENS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 142 | RRKNTMKKSGAKAKETKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 2e-32 | NF-YB family protein |