PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA67041.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family SBP
Protein Properties Length: 266aa    MW: 29292.8 Da    PI: 6.6586
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA67041.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP73.53.7e-23121168148
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 
                 +Cq+egC adls ak+yhrrhkvCe+hska+vv++ gl qrfCqqCs 
  PKA67041.1 121 MCQAEGCLADLSIAKHYHRRHKVCEFHSKAAVVIAGGLPQRFCQQCSS 168
                 6*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MNRSSSINGH FSSVMSSVGL HGGSTQRFQH PPPFLSDWET HCKLYPADSA AEATPAYLDP  60
CSLSPMNNIP LYMPPLPTAS DFGMDSRNAY FWQAEAASPA RWFSSSRGGF CAMSCLQLPP  120
MCQAEGCLAD LSIAKHYHRR HKVCEFHSKA AVVIAGGLPQ RFCQQCSSGW QTTTAGEGKT  180
PRGREADQSS PSAAINIFSS TDQKSKTAMI ANRMEDEGRK TSDYQQWRLN LPSDACSVPT  240
AGEEDDRHQQ NILLHLGQSM FEVEFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.23e-26SBP family protein