PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA67020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 285aa MW: 31529.6 Da PI: 9.0918 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104.7 | 5.4e-33 | 48 | 102 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG++ AtPk +l++m+v+gLt++hvkSHLQkYRl PKA67020.1 48 KQRLRWTHELHERFVDAVTQLGGPDGATPKGVLRVMGVPGLTIYHVKSHLQKYRL 102 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 64.1 | 2.7e-20 | 50 | 101 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg g+t +++ks++qky+ PKA67020.1 50 RLRWTHELHERFVDAVTQLGGPdgaTPKGVLRVMGvPGLTIYHVKSHLQKYR 101 89*************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 285 aa Download sequence |
MYQVKPITCI PPNHKSAAAR DHQLEFIGNT MGPNGSVSNH NNQNLASKQR LRWTHELHER 60 FVDAVTQLGG PDGATPKGVL RVMGVPGLTI YHVKSHLQKY RLAKYVPEST DGSKCENKGP 120 CELLSGLDNS SGMQITEALK LQMEVQKRLH EQLEVQRQLQ LRIEAQGKYL KKIIEEQQRL 180 SGVLAETPGS NLPLPLSSIV VFPNSERSDS STPESLHDER TSDGMHGNNG SLFKGSIRPY 240 SPSLRREPST PDSSSESLKL EPPIKRHRNT GNSGGGKAEL MLDHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G01060.1 | 2e-67 | G2-like family protein |