PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66978.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 324aa    MW: 34493.8 Da    PI: 6.174
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.42.9e-28145204259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgy+WrKYGqK++ +s fprsYYrCt++  gC++kkk++r +edp++ eitY+g+H+++
  PKA66978.1 145 DDGYTWRKYGQKNILKSSFPRSYYRCTHKnfGCTAKKKLQRLDEDPHTYEITYNGRHTCQ 204
                 8****************************999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDDILTQIFD ACRLVHDLET AIPHIADDPS AILLSVEVLA AAFHKVSGDL RALWGPFPFD  60
PSHVLIPHPP IAVPDPMGAI GETGFYAPLG TTTSGTPTSS NLPGGGDWRP EPSGQRSSKR  120
RRGGDESLTV RLPALLIGNL YLPPDDGYTW RKYGQKNILK SSFPRSYYRC THKNFGCTAK  180
KKLQRLDEDP HTYEITYNGR HTCQTSPTPL LIPSIAPPPA SHGTEARGAD TLIISASLQP  240
PLLPSAIELG GWISTSELGE GFQPHDAAGP SERPPPAAAA EPAAPAGAGR DGDGSVADMA  300
NAMFNTGSSS SSSMDIIFRA KQEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.12e-29WRKY family protein