PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66965.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 306aa MW: 34655.1 Da PI: 7.3408

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.2	3.9e-54	8	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+ +yL+++++++++++ ++i+evdiyk++PwdLp+k+k +++ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++ s +e+ PKA66965.1 8 LPPGFRFHPTDEELILHYLRNRAAASPCPA-SIIAEVDIYKFDPWDLPEKAKFGDREWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIAS-ASEN 104 79**************************.89***********99999*************************************.9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kk Lvfykgr pkg kt+W+mheyrl PKA66965.1 105 IGVKKALVFYKGRPPKGIKTNWIMHEYRL 133 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MLNPTTELPP GFRFHPTDEE LILHYLRNRA AASPCPASII AEVDIYKFDP WDLPEKAKFG 60 DREWYFFSPR DRKYPNGIRP NRAAGSGYWK ATGTDKPIAS ASENIGVKKA LVFYKGRPPK 120 GIKTNWIMHE YRLVDSHSSN TYKPIRLRDQ SMRLDDWVLC RIYKKSNHLL PGMADHGEEY 180 LELPKISLAS EFHEDYSPIS NHLQGQLDLP KLDSNGFIGN HCAEITGSLG YFLPQLSQPE 240 PLISIVAKRQ RISDGNSEGG IEGRNDVAGV FSPNFSSQFD GSQYSLFNQP FFSQPLLMNS 300 QHYGSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	1e-81	NAC family protein