PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66962.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 352aa MW: 39585.5 Da PI: 9.4326

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66962.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.1	2.4e-55	66	192	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdee++++yL++k+ ++ +++ +++ evd++k+ePwdLp+k+k +ekewyfF ++d+ky+tg+r+nrat+ gyWkatgkdke+++ kg l PKA66962.1 66 LPPGFRFHPTDEEIITHYLCPKLLHHGFTA-TAMGEVDLNKCEPWDLPSKAKMGEKEWYFFYSKDRKYPTGTRTNRATECGYWKATGKDKEIYRGKGIL 163 79***********************999.88***********99999****************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kktLvfy+grapkgekt+Wvmhe+r+ PKA66962.1 164 IGMKKTLVFYRGRAPKGEKTNWVMHEFRV 192 *************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MKYGDINTSH AKLLPHVPST ARIFVPNKKK NPLLFKALLP LPWLFLKCPL LHLFFLKLAM 60 DESLHLPPGF RFHPTDEEII THYLCPKLLH HGFTATAMGE VDLNKCEPWD LPSKAKMGEK 120 EWYFFYSKDR KYPTGTRTNR ATECGYWKAT GKDKEIYRGK GILIGMKKTL VFYRGRAPKG 180 EKTNWVMHEF RVEGKATLSN LPKPTKEEWV VCRVFHKSFG LKKSSLIRMN SFTSDLPDSP 240 TLPPLTDQTP SAFNCDADDG GSDLNTILAG SGHLSSSYFS SAVNVGSPPA PAFIRRRCAA 300 EQLSNQSMIS QETGISTTTD RNRTDVMSCA SYGSFDVPPA AALQDVADMW RW

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MKYGDINTSH AKLLPHVPST ARIFVPNKKK NPLLFKALLP LPWLFLKCPL LHLFFLKLAM  60
DESLHLPPGF RFHPTDEEII THYLCPKLLH HGFTATAMGE VDLNKCEPWD LPSKAKMGEK  120
EWYFFYSKDR KYPTGTRTNR ATECGYWKAT GKDKEIYRGK GILIGMKKTL VFYRGRAPKG  180
EKTNWVMHEF RVEGKATLSN LPKPTKEEWV VCRVFHKSFG LKKSSLIRMN SFTSDLPDSP  240
TLPPLTDQTP SAFNCDADDG GSDLNTILAG SGHLSSSYFS SAVNVGSPPA PAFIRRRCAA  300
EQLSNQSMIS QETGISTTTD RNRTDVMSCA SYGSFDVPPA AALQDVADMW RW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07680.1	9e-91	NAC family protein