PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA66902.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 239aa MW: 26620.9 Da PI: 6.6815 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.1 | 3.7e-17 | 19 | 64 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd ll d v++lG+++W++I++ ++ gR++k+c++rw + PKA66902.1 19 KGSWSQEEDALLRDSVERLGPRNWTLISAGIP-GRSGKSCRLRWCNQ 64 799*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 58.7 | 1.3e-18 | 73 | 115 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Edel+v a++++G++ W+tIar ++ gRt++ +k++w++ PKA66902.1 73 PFTPGEDELIVSAHQKHGNK-WATIARLLP-GRTDNAIKNHWNST 115 69******************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence |
MDRDSAERME RGEVEEKIKG SWSQEEDALL RDSVERLGPR NWTLISAGIP GRSGKSCRLR 60 WCNQLSPVVQ HIPFTPGEDE LIVSAHQKHG NKWATIARLL PGRTDNAIKN HWNSTLRRRH 120 RSESSASASA ASGPEDSETE SGKRQCRREV DLNLTRPPTP EAADLLTSLS LSLPGERSAA 180 AAIGVERRRE GEINRACMMS IMREMIAEEV RRYMDLLVAE GGSVLPIVVK EESASNEQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50060.1 | 8e-51 | MYB family protein |