PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA66793.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ZF-HD | ||||||||
Protein Properties | Length: 219aa MW: 24346.7 Da PI: 8.4094 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 84.3 | 1.3e-26 | 18 | 68 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 + rY+eC++NhAa++Gg+a+DGC+Efm+ + +alkCaACgCHRnFHRre + PKA66793.1 18 GGRYRECMRNHAAAMGGQAYDGCCEFMAG-----EEEALKCAACGCHRNFHRREGS 68 569*************************7.....4589***************965 PP | |||||||
2 | Homeobox | 14.5 | 5.9e-05 | 133 | 190 | 1 | 54 |
TT--SS--HHHHHHHHHHHH.....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFe.....knrypsaeereeLAkklgLterqVkvWFqNrRak 54 +r Rt+ft+eq e + e F+ + ++ + e+ e ++g++ + kvW +N+++k PKA66793.1 133 KRYRTKFTSEQREKMRE-FAdklgwRIQKHDDEALDEFCVEIGVKRHVLKVWMHNHKTK 190 799***********976.554776667888999999999999***************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MDLSLVPYVE PAPAERCGGR YRECMRNHAA AMGGQAYDGC CEFMAGEEEA LKCAACGCHR 60 NFHRREGSPS RHQLVLYDRK HSVLPAPAPV AFFPPSLPFH QIPPTAAPLA AGDSARGGSE 120 TPPRREELGA TRKRYRTKFT SEQREKMREF ADKLGWRIQK HDDEALDEFC VEIGVKRHVL 180 KVWMHNHKTK IPVPSADFSS SASAAVDREA APPAPTIRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 8e-49 | ZF-HD family protein |