PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA66739.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | DBB | ||||||||
Protein Properties | Length: 201aa MW: 21502.3 Da PI: 5.5691 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.7 | 1.8e-06 | 4 | 46 | 5 | 41 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e+ e+ C ++ lC C ++ H H++vp PKA66739.1 4 QCDVCERAEAVVLCCADEAALCWGCDEKVHAAnklagkHQRVP 46 7*****************************6688999999987 PP | |||||||
2 | zf-B_box | 31.5 | 3.7e-10 | 57 | 100 | 1 | 38 |
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 s++++C+ +++k +fC +++ lC++C +++H H+ PKA66739.1 57 SKMPICDICQDKVGYFFCLEDRAVLCRSCDVAIHAAtpavsnHQ 100 5799******************************6566666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MKVQCDVCER AEAVVLCCAD EAALCWGCDE KVHAANKLAG KHQRVPFLLP TAAPAASKMP 60 ICDICQDKVG YFFCLEDRAV LCRSCDVAIH AATPAVSNHQ RFLITGVRVS LQHYLGSNCR 120 RGGRATTAAI NSSNSSGSVG NSNNPPSSME ANSFDRNKEL LSEAGIVVED VGFGLQWPWS 180 EVLENAELDC CHGLSEPGSS T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78600.1 | 2e-53 | DBB family protein |