PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66735.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 677aa MW: 77133.1 Da PI: 8.3088

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66735.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.1	5.5e-27	93	181	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY++YA++vGF+vr+sks +s+ ++++++r+fvCsk+g++++++ +k+rr+r ++r gCka+l+v+++++g+wev+++ leH H+l PKA66735.1 93 FYSAYAERVGFRVRNSKSFTSRVDDTVIMRRFVCSKQGRPSKKDPFdLTKKRRNRISSREGCKAMLQVNRRDNGRWEVSRCFLEHCHQL 181 9************************************99887655899***********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MENIATLTTS LGFDSSHPGD VEPILQIQPQ QNLDEQILSL ESAIPFPLEG GDAGEGDPPL 60 PSSEALESFI PAGDLLEPKV GMEFESSDDA RAFYSAYAER VGFRVRNSKS FTSRVDDTVI 120 MRRFVCSKQG RPSKKDPFDL TKKRRNRISS REGCKAMLQV NRRDNGRWEV SRCFLEHCHQ 180 LGIALKQSAA VQRKLSRKPW ELIPTGIADT QQNGLGAGGG VAQSLLEYFK RMQAENPAFF 240 YAIQIDSSNC LANVFWADAR ARMSYNYFGD AIIFDMTCKK NKRVVPFAAF VGMNHHRHFI 300 TFGCAFMTDE SESSFTWLFE TWFSLMSGRY PVSLVIPFNE AIGAAAGKVL PHVRCRFCKR 360 DIFNKCKENL SDVYSVHASF KSEFKKCVNE SENISEFESR WRLLISKYSL EGNIWLQSLH 420 NIRHRWVPVF LRETFFAEIS GAPKLETMNK FFQRNSITTT TLRDIVAQFD KAMAGQYEKE 480 VHADFAMVHS RPVMKTPSPM EKQASEIYTR VIFDFFQEEL VESSGFLLEK VEDGLMIKFR 540 VTNVGDSSRA YLVNYTASEN RISCSCFMYE VSGILCRHMH RVLMVIGALT LPEDYIMKRW 600 TRNAKSSIFS FEQFTSVLSN SYGALTLRFS DLFRDVIRFA EEGAASAVMY KIAKEALQNA 660 FNEIFAVKRG PFFNKNK

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MENIATLTTS LGFDSSHPGD VEPILQIQPQ QNLDEQILSL ESAIPFPLEG GDAGEGDPPL  60
PSSEALESFI PAGDLLEPKV GMEFESSDDA RAFYSAYAER VGFRVRNSKS FTSRVDDTVI  120
MRRFVCSKQG RPSKKDPFDL TKKRRNRISS REGCKAMLQV NRRDNGRWEV SRCFLEHCHQ  180
LGIALKQSAA VQRKLSRKPW ELIPTGIADT QQNGLGAGGG VAQSLLEYFK RMQAENPAFF  240
YAIQIDSSNC LANVFWADAR ARMSYNYFGD AIIFDMTCKK NKRVVPFAAF VGMNHHRHFI  300
TFGCAFMTDE SESSFTWLFE TWFSLMSGRY PVSLVIPFNE AIGAAAGKVL PHVRCRFCKR  360
DIFNKCKENL SDVYSVHASF KSEFKKCVNE SENISEFESR WRLLISKYSL EGNIWLQSLH  420
NIRHRWVPVF LRETFFAEIS GAPKLETMNK FFQRNSITTT TLRDIVAQFD KAMAGQYEKE  480
VHADFAMVHS RPVMKTPSPM EKQASEIYTR VIFDFFQEEL VESSGFLLEK VEDGLMIKFR  540
VTNVGDSSRA YLVNYTASEN RISCSCFMYE VSGILCRHMH RVLMVIGALT LPEDYIMKRW  600
TRNAKSSIFS FEQFTSVLSN SYGALTLRFS DLFRDVIRFA EEGAASAVMY KIAKEALQNA  660
FNEIFAVKRG PFFNKNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-153	FAR1 family protein