PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66448.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB
Protein Properties Length: 282aa    MW: 29662 Da    PI: 8.2405
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.6e-08548344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT eEd+ + da + +       W++Ia  ++ g+ l+++k+++
       PKA66448.1  5 SWTWEEDKAFEDALAAHYDTcsdWWEKIAVALP-GKLLEEIKNHY 48
                     7*****************999*99*********.**********9 PP
2Myb_DNA-binding40.94.9e-13117161347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
       PKA66448.1 117 AWSEEEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKY 161
                      6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MVGESWTWEE DKAFEDALAA HYDTCSDWWE KIAVALPGKL LEEIKNHYAI LVEDVGSIES  60
GRVPVPSYSS SSCSFSPAAE GSADAGGSGK KGSHSHGDSG HGGKGSRSDH ERRKGIAWSE  120
EEHRLFLLGL DKYGKGDWRS ISRNFVVSRT PTQVASHAQK YFIRLNSMNK DRRRSSIHDI  180
TSISSGDSSV PQMPITGQGG NAAAGSSKSN KLQSPPPVAT GISIYGSTTM GQPVGGPLVP  240
AVGTPVGGPP LGYGVRPAVL VTGAPVALAT MGYALQNASA QR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-78MYB family protein