PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66384.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Trihelix
Protein Properties Length: 305aa    MW: 35228.9 Da    PI: 9.6481
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66384.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix76.54.2e-2457138186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W +qe+++Li++r e+e+++  ++++k+lW++ +++mre+g++r+p qC++kw+ l +ryk  ++ e ++     ++cp+f++l+
  PKA66384.1  57 QWGQQETRDLIAIRAELERDVAIDRRNKALWDAAASRMREKGYRRTPDQCECKWKTLVNRYKGKETAEADN----GRECPFFEELH 138
                 7**************************************************************99999984....567******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MVKVSDRMMS GGVEGDSLGG RAGMVVALTP KLNPAAAAEN LGGGGWAAKV KEEKVPQWGQ  60
QETRDLIAIR AELERDVAID RRNKALWDAA ASRMREKGYR RTPDQCECKW KTLVNRYKGK  120
ETAEADNGRE CPFFEELHAL FTEFQEKKQL LLLESETIDS KSKKNPKRVL GERSPDELSD  180
DDDAAGVAHV DSGEEERPTR SKKKKAVHKS RSTGESIHEL LQSFLQKQQQ IEARWWETMG  240
RRALERRRLQ EEWRKSMEKL ERERMMLERA WREREDQRRV REECRAGKRD SLLNTLLNKL  300
IRGDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.12e-25Trihelix family protein