PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66380.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 848aa MW: 96903.5 Da PI: 7.1636

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.2	1e-26	90	178	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YA +vGFsvr+++s++sk n++i++ +fvCskeg+++e++ +k+r++ a+ r gCka+l+v ++ d+kw+vtkl +eHnHe+ PKA66380.1 90 FYIAYAGKVGFSVRIARSRRSKCNESIIMLRFVCSKEGFSREKRIIaGKKTRKRAASIREGCKAMLEVIRRGDEKWVVTKLIKEHNHEV 178 9************************************998876546788888999****************************96 PP
2	FAR1	58.6	2e-18	212	303	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YA+++GF+ r+++s++s ++++ ++ ++vCsk+ +++ ++++ ++ r+ +r gC+a +++ +++ ++w+v+klel+H+Helap PKA66380.1 212 FYYAYASRMGFEARVRQSRRSLHDESLKMLKLVCSKHRYHSGRDENGDDGRKglVPDPSREGCNALFEIVRKDADVWMVSKLELDHTHELAP 303 9****************************************9996666663456789****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 848 aa Download sequence
MDGSGNAGNG LMEGHVDLDD NINFWATFGV SPHVVVEPEN SIQHHEQQIE PQLEFSEQPV 60 RRELCLVEVD PRIEPYVGME FDSGEAAKTF YIAYAGKVGF SVRIARSRRS KCNESIIMLR 120 FVCSKEGFSR EKRIIAGKKT RKRAASIREG CKAMLEVIRR GDEKWVVTKL IKEHNHEVGM 180 PSKVHYIATE GDAELVPYVG MEFESLEMAK TFYYAYASRM GFEARVRQSR RSLHDESLKM 240 LKLVCSKHRY HSGRDENGDD GRKGLVPDPS REGCNALFEI VRKDADVWMV SKLELDHTHE 300 LAPSPHSKVR CVRSQGEILV IAKNFSDTRN LLLSSQDSQG YPREIRYNDL GPEDAQNLLE 360 YFKKTQMDNP AFFYALQYEQ NNCMTNIFWA DAKARMAYHY FGDSVTLDFS YKNNKDFMPL 420 LLFTGVNHHL QPVIFGCALL VDESEASFIW LFEQWLAAML SHYPVSLVSI FSWAIANAAA 480 KVLPNTRLIF CRKHILSTLL DELPELCESH SIFEEELTGC VEECRTIELF ESRWSSIINK 540 YDLRDNAYFR SLFGIRDKWV PLYLRDTFCV EASASLRSET FDKVVEKYCN AKSPLRVAVR 600 QFGQSIANSC EKEAQADYIT LFEKPFLRTA SPMEKQASGI YTRIMFEKFQ EEFVESLGYH 660 VDKIEDGTHG KYQVARNEDV AGAYTVTFNP SENKAQCSCS MFEVSGILCR HVLRVFMIAG 720 VRALPNEYIL KRWMKNAKSA YIFEEFGVET RANSEESSAA RYADLYRDAV RCAKEGATSP 780 ELYCVAKEAI QKAIAEVVSA KQKRGEQILQ SFKRAQKKGM KKPAKATIKK DDSSKLLKMT 840 TSPENDFR

Sequence ? help Back to Top

Protein Sequence Length: 848 aa Download sequence

MDGSGNAGNG LMEGHVDLDD NINFWATFGV SPHVVVEPEN SIQHHEQQIE PQLEFSEQPV  60
RRELCLVEVD PRIEPYVGME FDSGEAAKTF YIAYAGKVGF SVRIARSRRS KCNESIIMLR  120
FVCSKEGFSR EKRIIAGKKT RKRAASIREG CKAMLEVIRR GDEKWVVTKL IKEHNHEVGM  180
PSKVHYIATE GDAELVPYVG MEFESLEMAK TFYYAYASRM GFEARVRQSR RSLHDESLKM  240
LKLVCSKHRY HSGRDENGDD GRKGLVPDPS REGCNALFEI VRKDADVWMV SKLELDHTHE  300
LAPSPHSKVR CVRSQGEILV IAKNFSDTRN LLLSSQDSQG YPREIRYNDL GPEDAQNLLE  360
YFKKTQMDNP AFFYALQYEQ NNCMTNIFWA DAKARMAYHY FGDSVTLDFS YKNNKDFMPL  420
LLFTGVNHHL QPVIFGCALL VDESEASFIW LFEQWLAAML SHYPVSLVSI FSWAIANAAA  480
KVLPNTRLIF CRKHILSTLL DELPELCESH SIFEEELTGC VEECRTIELF ESRWSSIINK  540
YDLRDNAYFR SLFGIRDKWV PLYLRDTFCV EASASLRSET FDKVVEKYCN AKSPLRVAVR  600
QFGQSIANSC EKEAQADYIT LFEKPFLRTA SPMEKQASGI YTRIMFEKFQ EEFVESLGYH  660
VDKIEDGTHG KYQVARNEDV AGAYTVTFNP SENKAQCSCS MFEVSGILCR HVLRVFMIAG  720
VRALPNEYIL KRWMKNAKSA YIFEEFGVET RANSEESSAA RYADLYRDAV RCAKEGATSP  780
ELYCVAKEAI QKAIAEVVSA KQKRGEQILQ SFKRAQKKGM KKPAKATIKK DDSSKLLKMT  840
TSPENDFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-144	FAR1 family protein