PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA66293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 408aa MW: 44940.6 Da PI: 6.2738 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 258.1 | 3.1e-79 | 57 | 407 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 v++L+++Ae +++gd+ a+++Larl+++ +p+g+p+ R a++f+eAL++ + ++ +l+a+k+f e+sP+l+f+++t+ PKA66293.1 57 VDQLFKAAEQIEAGDTISAHRILARLNQQlPAPSGKPLIRSAFFFKEALSSIATP----------------IDVLLKLSAYKAFAEISPVLQFTNFTTT 139 579************************998*******************997776................2377889********************* PP GRAS 100 qaIleav.egeervHiiDfdisqGlQWpaLlqaLasRpeg....ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193 q Ile++ +g++ +HiiDfd++ G +W aL+q+L++R++ +p+lRiT++ s s++ el+ ++e+L++fA++l++p+e ++l ++++ + + + PKA66293.1 140 QSILEELtAGANSIHIIDFDLGVGSHWSALIQELSQRRSAamtvAPKLRITAFTSLGSHHPLELHLIQENLTHFAANLNLPLELHFLPLESFDPVAILS 238 ****9862567************************9994445559************9*****************************888888888888 PP GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292 + ++ E++aV l ++l++ + +l++ +vL+l+k+lsPk+++ ve+ +++n+ +F ++f++a++ ++ l++s+ea+ + + e + k+Er ll++ PKA66293.1 239 TSSNSAENIAVILPVSLFSYH----PLAK---TVLSLIKQLSPKIMISVEHGCSRNDLPFSQHFFHAFQSHTLLLESIEAS-GINPEIAEKIERYLLQP 329 88888************9997....7777...9*********************************************999.88999************ PP GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +i++ v + ++ +l Wr+ l +aGF pv++s++a++ a++l+++ ++g+rv +++ sl+l W++ + svSaWr PKA66293.1 330 RIESSVLGRYQA----GVKLLPWRMLLASAGFVPVKFSNFAETMAECLIKRALVRGFRVSKNQSSLLLSWQQGDIASVSAWR 407 *******99998....8899*************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence |
MAVVSGDEWA AELQPVPASL RSVEDWESML PEPAADSGRD PSFLHWFGAD ADEAVKVDQL 60 FKAAEQIEAG DTISAHRILA RLNQQLPAPS GKPLIRSAFF FKEALSSIAT PIDVLLKLSA 120 YKAFAEISPV LQFTNFTTTQ SILEELTAGA NSIHIIDFDL GVGSHWSALI QELSQRRSAA 180 MTVAPKLRIT AFTSLGSHHP LELHLIQENL THFAANLNLP LELHFLPLES FDPVAILSTS 240 SNSAENIAVI LPVSLFSYHP LAKTVLSLIK QLSPKIMISV EHGCSRNDLP FSQHFFHAFQ 300 SHTLLLESIE ASGINPEIAE KIERYLLQPR IESSVLGRYQ AGVKLLPWRM LLASAGFVPV 360 KFSNFAETMA ECLIKRALVR GFRVSKNQSS LLLSWQQGDI ASVSAWRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00150.1 | 6e-89 | GRAS family protein |