PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA66281.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | HB-other | ||||||||
Protein Properties | Length: 233aa MW: 26573.5 Da PI: 6.5089 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.2 | 1.6e-09 | 25 | 62 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + PKA66281.1 25 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 62 664459******************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MESHPWRPQR GLPERSVSIL RSWLFEHFLH PYPSDVDKHI LARQTGLSRS QVSNWFINAR 60 VRLWKPMVEE MYLEEQKEEE EKRKSQMTSQ ATTHREGGRG QSISNPNPNS NLNPSSSHPL 120 FEDQKPEPSR CHLHIDHDPH SLSSIITGMN SHHHNPNLNQ SFGILDGDFA AYRGHELTLG 180 LQQHERPLVF SREPIGVGDD GSDAVQFSMI EGEGQNIPYR NLMGAQLLHD LAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41410.1 | 2e-51 | TALE family protein |