PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66205.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB_related

Protein Properties

Length: 531aa MW: 58998.2 Da PI: 8.8356

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	5.8e-16	240	284	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+rWT++E+ ++++a k++G W++I +++g ++t+ q++s+ qk+ PKA66205.1 240 RDRWTEDEHNKFLEALKLYGRA-WRRIEEHIG-TKTAVQIRSHAQKF 284 89****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MQIFTIGEGK EKRKGGEGRG CHVRGDGKSE PQKKRAVSRS SQREKIGADV AGHPRFLFTT 60 TLFPTSPLPH LFPFPFFAEN LLPPPLPPLL LNSLFFRFPR DLLPERRDSP TTLPSEKGGE 120 CCFCWDRFVS FETGLRHSIG FFYRNLSVIS GMGLLCFLLN DSSVGILFAI EAMNDGDVSF 180 WGLLIFLASK ILCVFSTKEM CVDMGETSSV DCIQQMNEGD SSVSEHTIKA RKPYTITKQR 240 DRWTEDEHNK FLEALKLYGR AWRRIEEHIG TKTAVQIRSH AQKFFSKVSR ESLSSSTCIL 300 KAIEIPPPRP KKKPNRPYPR KLVQPRNKNG HVACPSGATE ALSNEQDILM TESDFGIQEN 360 FTSKEADSKE VTGTMLTSIK LFGRTVIVSS STQPDISNEN TNQQNGQRDA VFSSSYSEPP 420 NTPYYLPSHG GFVSSAEAAI VSFPCLWALY GDNPFPFSNR DRAELEPRKE TSSQACFRSN 480 VGNSALPDPP CNKVLSASVL KPSKNSAFSC LKPLSSSLKT GFAPYKTSLG L

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MQIFTIGEGK EKRKGGEGRG CHVRGDGKSE PQKKRAVSRS SQREKIGADV AGHPRFLFTT  60
TLFPTSPLPH LFPFPFFAEN LLPPPLPPLL LNSLFFRFPR DLLPERRDSP TTLPSEKGGE  120
CCFCWDRFVS FETGLRHSIG FFYRNLSVIS GMGLLCFLLN DSSVGILFAI EAMNDGDVSF  180
WGLLIFLASK ILCVFSTKEM CVDMGETSSV DCIQQMNEGD SSVSEHTIKA RKPYTITKQR  240
DRWTEDEHNK FLEALKLYGR AWRRIEEHIG TKTAVQIRSH AQKFFSKVSR ESLSSSTCIL  300
KAIEIPPPRP KKKPNRPYPR KLVQPRNKNG HVACPSGATE ALSNEQDILM TESDFGIQEN  360
FTSKEADSKE VTGTMLTSIK LFGRTVIVSS STQPDISNEN TNQQNGQRDA VFSSSYSEPP  420
NTPYYLPSHG GFVSSAEAAI VSFPCLWALY GDNPFPFSNR DRAELEPRKE TSSQACFRSN  480
VGNSALPDPP CNKVLSASVL KPSKNSAFSC LKPLSSSLKT GFAPYKTSLG L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10113.1	7e-35	MYB_related family protein