PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA65975.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 83aa MW: 9091.26 Da PI: 9.2809 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 8.1e-17 | 24 | 70 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 + GVr+++ +gr++AeIrdp + + r++lg+fgta+eAa a+++ +++ PKA65975.1 24 FLGVRRRRPWGRYAAEIRDPAT---KERHWLGTFGTAYEAAVAYDRVANS 70 56*****************843...4********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence |
MVACLPTAGM VKAAGDGISE PGRFLGVRRR RPWGRYAAEI RDPATKERHW LGTFGTAYEA 60 AVAYDRVANS DEGCSGQNQL HLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18560.1 | 3e-27 | ERF family protein |