PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65677.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 416aa    MW: 46075.3 Da    PI: 7.3107
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.29.7e-16133175754
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++E++RR+r N++fe L++l+P++     +K++Ka+iL  +++YIk+L
  PKA65677.1 133 KNEKQRRQRFNDKFEILKSLIPNS-----TKPDKASILSDTIDYIKEL 175
                 68*********************9.....9****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MDPSSAIAYS DLPLTGSEHL DHDDHRQFWE PGGPSSFPIF DAAAGLQTVA HRSLRSSAEG  60
FFSEFSSYGA PAVPAVFYDQ TAASPVVAMN LSLDGGFNHG PFLGGMEVRR PKMESKKKKS  120
KAGDLYEDFG TQKNEKQRRQ RFNDKFEILK SLIPNSTKPD KASILSDTID YIKELSRTVQ  180
ELRLLVAKKR SKIERGIKPE NDDELHGEMD SSSISKPSTT TYVESDHGLN GAMRSSRVQR  240
RSKGTFVDVR IVEDEVYIKL AQRRRVGCPL IVSRVLDELQ LEPMHLTGGN IGDILIYMKA  300
HQCMQVQWLG GSLKLWRISD FCAASLDIIL AIQFNADLCP HQYTMQCPTE GNSAFFYRAC  360
TISEENSGMD GDSLVMPPLP SHRNFFVSIS RLPLVASNSS GVGGPKLSRV MCPTSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31220.16e-34bHLH family protein