PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65669.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB
Protein Properties Length: 279aa    MW: 31525.2 Da    PI: 4.6976
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.72.7e-181865148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT +Ed ll ++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
       PKA65669.1 18 RGPWTSDEDFLLTNYIAIHGEGRWNSLARCAGLNRTGKSCRLRWLNYL 65
                     89********************************************97 PP

2Myb_DNA-binding44.43.8e-1471114146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+ E++l++ +  ++G++ W++Ia++++ gRt++++k++w++
       PKA65669.1  71 RGNITPAEQLLIIVLQSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 114
                      7999******************.*********.***********96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDMGELRIHS EEEIEPRRGP WTSDEDFLLT NYIAIHGEGR WNSLARCAGL NRTGKSCRLR  60
WLNYLRPDVR RGNITPAEQL LIIVLQSRWG NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA  120
KQLRCDVNSK QFKDALRYLW LPRLIERIAA DNSAAEAADC GDLAGGDQTF SGGNNVDVIP  180
LLEESGRESS SSSSVGSTSL GCSTDVTTGS PANAVSGGCE IMQDFWPPET GCEWWREPVM  240
PSPGEYDYDG GLMPEPEQLW GGEMNDSLWS VERIWQLQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06490.11e-77MYB family protein