PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA65609.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | EIL | ||||||||
Protein Properties | Length: 580aa MW: 64887.4 Da PI: 4.7995 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 476.1 | 2.2e-145 | 76 | 430 | 1 | 344 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 eel++rmw+d+ +lkrlke+++++ ke +++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WWkekv PKA65609.1 76 EELERRMWRDRLRLKRLKEQQQNKN--KEL-CNSTKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRGWWKEKV 171 8*********************964..887.9999**************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----G CS EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkp 198 +fdrngpaai+kyq +n i++ ++++++ +++hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+G+e+ww++lg+ kdq +ppykkp PKA65609.1 172 RFDRNGPAAITKYQFDNGIPGPNKEKNS-TPVSPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPSGNEDWWSQLGFTKDQTPPPYKKP 269 ***********************99988.99******************************************************************** PP GG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX....XXXXXX..XXXXXXXXXXXXXXXX....XX CS EIN3 199 hdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah....ssslrk..qspkvtlsceqkedve....gk 287 hdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+v++qe+++++++ ++ +ss+++ + +++ s+++++dve gk PKA65609.1 270 HDLKKAWKVGVLTAVIKHMSPDIDKIRRLVRQSKCLQDKMTAKESATWLAVIKQEDDLYRELNPEacllPSSMSNcnGTISFN-SSGSEYDVEhvdeGK 367 *****************************************************************877644555532444444.455699999644433 PP XXXX.XXXXXXXXXX..................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXX CS EIN3 288 keskikhvqavktta..................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifa 344 +e+++++ + + ++++kr +se++++s++ s+++++++++++f PKA65609.1 368 NEEEMNQNLL----DannafnvnassgdglfsgNSNFIKKRP-ATSEPEIISTQ-------SAKCPRNDYQFGFI 430 3333222222....2456799******999999999999998.78888888766.......66777777777765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 580 aa Download sequence |
MGGLVVEGVN LCGALDFTQS MPAGMDENGG FISILQHTNC GDSSVIDGDL VDPSSENFPE 60 SMPDDDGESD EDIDVEELER RMWRDRLRLK RLKEQQQNKN KELCNSTKQR QSQEQARRKK 120 MSRAQDGILK YMLKMMEVCK AQGFVYGIIP EKGKPVSGAS DNLRGWWKEK VRFDRNGPAA 180 ITKYQFDNGI PGPNKEKNST PVSPHSLQEL QDTTLGSLLS ALMQHCDPPQ RRFPLEKGVP 240 PPWWPSGNED WWSQLGFTKD QTPPPYKKPH DLKKAWKVGV LTAVIKHMSP DIDKIRRLVR 300 QSKCLQDKMT AKESATWLAV IKQEDDLYRE LNPEACLLPS SMSNCNGTIS FNSSGSEYDV 360 EHVDEGKNEE EMNQNLLDAN NAFNVNASSG DGLFSGNSNF IKKRPATSEP EIISTQSAKC 420 PRNDYQFGFI EGDMSTNNLQ FLLNHSANPP SVAEAGFLVS DNKPFIFSTP VANTCSSFNI 480 SCIDLPDDGP KSIIELMNQY DSNINHSKGP ITNQLGESNT SQFFSLHEDL QPQSNEMDND 540 YRFGSSFNIM TSMDFTDSSL PRGAGMGETL QNHNISGWFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G20770.1 | 1e-153 | EIL family protein |