PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA65598.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Dof

Protein Properties

Length: 399aa MW: 43969.1 Da PI: 7.6322

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA65598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.9	1.2e-39	88	147	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GGa+rnvPvG+grrk+k+ PKA65598.1 88 PDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKHP 147 7899*****************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MSEVRDSNIK LFGRTITLPE DGAEVIGGID RGKDKSEESP GKLDHSDLNN SADSDQKTPT 60 DHDGQKEAEK QDHKQTESSG EDKLLKKPDK ILPCPRCNSM ETKFCYYNNY NVNQPRHFCK 120 NCQRYWTAGG AMRNVPVGAG RRKSKHPPSS HRHLTITSDV LASLQADRSP LKGNSTVLKF 180 GPEAPLCESV ASVVNIAESS RTCSTACREE NGEEPSCSNG FPEDSKRIDQ HVLRCSPWPP 240 WAYPWNLQWN SAAYDSSYPI STSFSGIRPP TFCAPPSPLP ILPANMWGCM VSWNGAPWYL 300 PWLGNAKELS PTFSSANTNN CSGYGFPTLG KHSREEKTQK SLWVPKTLRI DDPAEAAKSS 360 IFATLGIKLE RREEGSGGAQ VLQANPAALS RSQSFHEAI

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MSEVRDSNIK LFGRTITLPE DGAEVIGGID RGKDKSEESP GKLDHSDLNN SADSDQKTPT  60
DHDGQKEAEK QDHKQTESSG EDKLLKKPDK ILPCPRCNSM ETKFCYYNNY NVNQPRHFCK  120
NCQRYWTAGG AMRNVPVGAG RRKSKHPPSS HRHLTITSDV LASLQADRSP LKGNSTVLKF  180
GPEAPLCESV ASVVNIAESS RTCSTACREE NGEEPSCSNG FPEDSKRIDQ HVLRCSPWPP  240
WAYPWNLQWN SAAYDSSYPI STSFSGIRPP TFCAPPSPLP ILPANMWGCM VSWNGAPWYL  300
PWLGNAKELS PTFSSANTNN CSGYGFPTLG KHSREEKTQK SLWVPKTLRI DDPAEAAKSS  360
IFATLGIKLE RREEGSGGAQ VLQANPAALS RSQSFHEAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-64	Dof family protein