PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA65486.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | WRKY | ||||||||
Protein Properties | Length: 207aa MW: 22595.3 Da PI: 9.4834 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.8 | 1.3e-29 | 63 | 122 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +C+vkkkv+rs ed ++++ tYegeHnh+ PKA65486.1 63 VKDGYQWRKYGQKVTRDNPSPRAYFRCSFApSCTVKKKVQRSVEDRSILVATYEGEHNHR 122 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MSSAPETRKR RSESQESRES NGEANKGESL SSEDSYKRMR VDSKTCLSKI CARTDPSDST 60 LVVKDGYQWR KYGQKVTRDN PSPRAYFRCS FAPSCTVKKK VQRSVEDRSI LVATYEGEHN 120 HRPPLQGEAP AGRAGHGGSS STQVPAVSMN SASSGTITVD LACREMASPE FQRILIEQMA 180 ASLAKDPTFK ASLASAISGR IFELPPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 7 | 12 | TRKRRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 2e-62 | WRKY family protein |