PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA65385.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | E2F/DP | ||||||||
Protein Properties | Length: 197aa MW: 21110.1 Da PI: 9.8102 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 27 | 7.6e-09 | 145 | 180 | 1 | 39 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedv 39 r+++sL+llt+kf++ll+++++gi++ln++a++L +v PKA65385.1 145 RYDSSLGLLTKKFISLLKHAQDGILDLNKAAETL---EV 180 6899*****************************9...54 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MSGGRAAGSR PTPPPGQIFH QLKRNLPLSS SRPPFVSPDE YHQFSPVISH REATAEGVVS 60 IAIKTPLKRK AVREANDAAE LNEWTDSPGC AEVDSSSLLT PVSGKVGRNY CRSKVAKHNK 120 SGPQTPLSNA GSPSSNLLTP VSTCRYDSSL GLLTKKFISL LKHAQDGILD LNKAAETLEV 180 RLAAPLLCPK QLFVAMD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.3 | 2e-37 | E2F/DP family protein |