PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65334.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 343aa    MW: 36796.6 Da    PI: 5.2544
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.57.9e-18228262135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C t kTp+WR gp g+ktLCnaCG+++++ +l
  PKA65334.1 228 CLHCDTDKTPQWRTGPMGPKTLCNACGVRFKSGRL 262
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MEAPEYFHGG NCLTVAAKLP QEKQGKAGRD QFTVEDLLDF SNGDDDDAGM AAGDGGRSDP  60
ADFSTITAVD SSSNSFSGCS ETQFSGELDC RSLTDTGITG EICASYEETA ELEWLSNFVE  120
ESFYPENHQK LQIISGNGDD SAAGVAGDNE STLPPVFPPE AAVPGKARSK RPRSAPFSWS  180
SRLQLVAPPS ATSYSEFNTS GSQSSGKKVA KKREPSRAAA PAADGRRCLH CDTDKTPQWR  240
TGPMGPKTLC NACGVRFKSG RLVPEYRPAA SPSFVLSKHS NSHRKVLELR RQKELQQQYQ  300
QQLLNVGSAG CIYNAAAAAA AATTVADDFL IHQQLGTDFR QLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.13e-63GATA family protein