PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA65069.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 321aa MW: 34656.6 Da PI: 6.4058

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA65069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.3	3.2e-33	167	224	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCtsa C+vkk+vers +dp++v++tYeg+H+h+ PKA65069.1 167 EDGYRWRKYGQKAVKNSPFPRSYYRCTSAVCSVKKRVERSCKDPTIVVTTYEGQHTHP 224 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MGLEKGEEVT EVMEGAASSL FSDVLWPGFP INSAILDLPD EAGGGGSESP DFMELLGLQD 60 LSQSLFNSTP PIQTPQAAPP AESSETVNFP ATPNSSSMSS SSTDAANDAD RVAQATAPEA 120 VGDEGAELGR GKTIRGSNSK GEKKKGQKRQ REPRFAFMTK SEVDHLEDGY RWRKYGQKAV 180 KNSPFPRSYY RCTSAVCSVK KRVERSCKDP TIVVTTYEGQ HTHPSPVVPR GTHRYAPPPP 240 SAWSSPYLPI FSSCLPSTQT LEFRQHISNT PPFDYATSFA ASVGDARRHR EPAAAAAAGA 300 VRDHGLLQDL IPAKVMKTDQ E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	2e-42	WRKY family protein