PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64944.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 279aa MW: 30124.3 Da PI: 7.1647

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105	4.1e-33	140	197	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+ PKA64944.1 140 EDGYRWRKYGQKAVKNSPFPRSYYRCTNNKCTVKKRVERSSEDPSIVITTYEGQHCHH 197 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MEDDKISSIA ESSNWNFSGD GGGGFAYLCG VGDSREIVGG IMDDLGWITR RVREEDVAAG 60 PASLAQPDLR EASGSAAARS SAASGSGDVA SSSSSEGPPA DTGDKLPADS ASNKSAKKSQ 120 KRLRQQRFAF MTRSEIDHLE DGYRWRKYGQ KAVKNSPFPR SYYRCTNNKC TVKKRVERSS 180 EDPSIVITTY EGQHCHHTVT FPRSGAAIGL QYPHINTTAL AEQLALSTHS QYLSTTCLNP 240 PQMHQLTPSL PSVPELSRTT APSDDGLLGD VVPPEMRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	1e-55	WRKY family protein