PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64697.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 328aa MW: 36358.2 Da PI: 6.3934

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64697.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.8	4.6e-33	189	247	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers edp+vv++tYeg+H+h+ PKA64697.1 189 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCAVKKRVERSFEDPSVVITTYEGQHTHH 247 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MSGEKGELYH PEHFFYDPYT LFHHRPSGGL YFGDLHDQFE AAPPHPYPGF PDYLQSSGDY 60 GLLPKPFDLL SAPAPPEILY PAAINDSINE TPTETTAGAQ AGSFAAAHGG KTTPESSSSA 120 EEDSGFCEAT KDRKNDPEGK EEENKPAAKE DAEEGSDKAK IIDKLKKKGD KRQREPRFAF 180 MTKSEVDHLD DGYRWRKYGQ KAVKNSPYPR SYYRCTTQKC AVKKRVERSF EDPSVVITTY 240 EGQHTHHCPP SIRGSSHILG NTPAAMVPRF YSELPGQHFS QLVSQIGSDP VRAPGSYLHT 300 LAPSVQQLSS YSTLQDFIPP FINSSGQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18170.1	1e-47	WRKY family protein