PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA64478.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 23877.8 Da PI: 6.1244 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.5 | 1.7e-18 | 67 | 117 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+ +++g PKA64478.1 67 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAAISIKG 117 68*****998.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MKDLRSSPEQ ESSSMNCASS PSSSLPSSPL FIHTAAPALT PSPTSDSKTI AGAVAGGKRS 60 RDRSKHPVYR GVRMRNWGKW VSEIREPRKK SRIWLGTFPT PEMAARAHDV AAISIKGSSA 120 ILNFPDLAPS LPRPATLSPR DVQAAAAKAA AMEPATPATP SADELGEIVE LPRLGCSCFL 180 DAGGGGEIVY QETIDSWPES TTDDSGFFHD WQLNNFENLL WD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 6e-57 | ERF family protein |