PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA64454.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Trihelix
Protein Properties Length: 295aa    MW: 32812.1 Da    PI: 10.2482
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA64454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.55.2e-1616104186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++ e+  Li+a  ++  +l+rg+l++++W+ev++++       r   r+ +qCk++++ l+k+yk++k   +++ + +s ++p++++l+
  PKA64454.1  16 CWSEGETSMLIDAWGDRYLELNRGNLRQKQWQEVADAVnarpgGGRRPPRTHVQCKNRIDTLKKKYKNEKGKISDG-ALAS-QWPFYSRLD 104
                 7*************************************88655445557899********************9998.4554.8*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MEGRPPNPAM PYREDCWSEG ETSMLIDAWG DRYLELNRGN LRQKQWQEVA DAVNARPGGG  60
RRPPRTHVQC KNRIDTLKKK YKNEKGKISD GALASQWPFY SRLDMLVGSS VPAKKPPSSP  120
PLALPLPSHR KGLHLPAAAA AAAAAAVRPV DPLPKENRPS AGAILADDSF FRKNYSVAAA  180
AAAAAADGES GSSSRSSRSS MERSRSSRER PGRGCRKRGE GHDGDGIRDL ARAIERFAEI  240
YEKVEADKQR EMIELEKQRM EFIKGLEFQR MQMFVDTQVQ LEKIKRARRS DDGEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.19e-34Trihelix family protein