PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA64222.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 248aa MW: 27238.7 Da PI: 6.3488 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l ++v+++G+g +W + +++ g++R++k+c++rw++yl PKA64222.1 14 RGPWSPEEDSALRRYVELHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 39.2 | 1.6e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T eEd+ + + k G++ W+ Ia+ ++ gRt++++k++w++ PKA64222.1 69 GGFTDEEDDVIFSLYKSIGSR-WSIIASQLP-GRTDNDVKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGRAPCCDKA NVRRGPWSPE EDSALRRYVE LHGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPDIRHGG FTDEEDDVIF SLYKSIGSRW SIIASQLPGR TDNDVKNYWN TKLKKKIMAA 120 GEPLITKTHH QSLSPLPAVP APTVNVEVFF PNDIENTTSA LAPVNSCNLG YPFGLPQLPP 180 ADDVSASSSA SSSSIPVASE NFDDFFLPEL GFSYWNTDLL TAGFSSPSYP PLMATCANSE 240 VEHQGIYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 1e-72 | MYB family protein |