PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64213.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 725aa MW: 83349 Da PI: 8.1485

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64213.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.8	2e-19	77	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GF +r+++sk + + ++kr++vC + g++ ++k+++ k++r+++++r++C+a++ +kk+ ++w v ++++ HnHel PKA64213.1 77 EYYTNFARNNGFAIRRERSKGNpGHPLGVYKRELVCHRAGQSLPRKTAELKRQRNKKSSRCKCDAQMIIKKNVskgISRWIVVHFSNTHNHELL 170 69***************999755556****************99999**************98756689***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
MTKSSCRNGC LTFRRQCPCG VEQCLLKIEG DEEDLPLEPL IEASLSNGPS QNSSGTMSVD 60 APPYVGQSFR TDDEAQEYYT NFARNNGFAI RRERSKGNPG HPLGVYKREL VCHRAGQSLP 120 RKTAELKRQR NKKSSRCKCD AQMIIKKNVS KGISRWIVVH FSNTHNHELL DSEEVRHLPA 180 YRSISSTDRE NILCLAKRGF TVNHIMRALE TEKGLKPGQL SFTERDLRNF LQASKSINKE 240 NEGAEFVKAC KAMKDKHLDF RFEFTLDESE RVEHIAWSYP DSFQAYRLFG DVVVFESSYN 300 LYAYDRLFGV WFGLDNYGNA ILFGCVLLQD VKPHSFRWAL QSFVRLMEGK YPRTLLTDLD 360 MGLKDALVSE LPSTKHAFAI WHITSKLCSW FSALLGSQYE KFVSEFVRVC NLDNMVEFEH 420 QWNQMVLDFG LGSDRHIAIL SFHREYWALP YLRGCFLGGL MRSGLPASIK SFFNGSLNSQ 480 TRLRDFLEQV GFAMDILNQA GEEATLRQNY QIIKTRTCMP IEEQALNILT PYAFDIFQRE 540 IIESMQFAVY ETVRENYLVR HRLMINGGHL VRCVQPENDI QCSCQEFESS GILCRHALRV 600 LSLKNYFMLP DQYLLIRWRR ESSLFPKSTG YKFRSQALRS LASIIVQESS VTKDRFDYVQ 660 WHMSKLLNHV RDMPTVDETT SDVEPSSSYD AGVAALPRTN AKGRPKKMKD VAETEAKNHS 720 QIPDL

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

MTKSSCRNGC LTFRRQCPCG VEQCLLKIEG DEEDLPLEPL IEASLSNGPS QNSSGTMSVD  60
APPYVGQSFR TDDEAQEYYT NFARNNGFAI RRERSKGNPG HPLGVYKREL VCHRAGQSLP  120
RKTAELKRQR NKKSSRCKCD AQMIIKKNVS KGISRWIVVH FSNTHNHELL DSEEVRHLPA  180
YRSISSTDRE NILCLAKRGF TVNHIMRALE TEKGLKPGQL SFTERDLRNF LQASKSINKE  240
NEGAEFVKAC KAMKDKHLDF RFEFTLDESE RVEHIAWSYP DSFQAYRLFG DVVVFESSYN  300
LYAYDRLFGV WFGLDNYGNA ILFGCVLLQD VKPHSFRWAL QSFVRLMEGK YPRTLLTDLD  360
MGLKDALVSE LPSTKHAFAI WHITSKLCSW FSALLGSQYE KFVSEFVRVC NLDNMVEFEH  420
QWNQMVLDFG LGSDRHIAIL SFHREYWALP YLRGCFLGGL MRSGLPASIK SFFNGSLNSQ  480
TRLRDFLEQV GFAMDILNQA GEEATLRQNY QIIKTRTCMP IEEQALNILT PYAFDIFQRE  540
IIESMQFAVY ETVRENYLVR HRLMINGGHL VRCVQPENDI QCSCQEFESS GILCRHALRV  600
LSLKNYFMLP DQYLLIRWRR ESSLFPKSTG YKFRSQALRS LASIIVQESS VTKDRFDYVQ  660
WHMSKLLNHV RDMPTVDETT SDVEPSSSYD AGVAALPRTN AKGRPKKMKD VAETEAKNHS  720
QIPDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein