PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64193.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

SRS

Protein Properties

Length: 316aa MW: 32362.7 Da PI: 7.5011

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	221.1	2.3e-68	98	247	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaeskkel 100 sg+ sCqdCGnqakkdC+h+RCRtCCksrg++C thvkstWvpaakrrerqq+laaa +++a +++skr+rel s++ +l ++++s +++ e+ PKA64193.1 98 SGGLSCQDCGNQAKKDCSHMRCRTCCKSRGLQCPTHVKSTWVPAAKRRERQQHLAAAVGESSAGGgGAENSKRPREL-SARFPTLIASTTSGGTA--EV 193 7889************************************************99988766555458999999997.66666777777677654..58 PP DUF702 101 etsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + s+P+ev s+avfrcvrvs vd+ e+++aYqtav+igGhvfkGiLydqG+e+ PKA64193.1 194 GALSFPAEVCSPAVFRCVRVSPVDETEDQFAYQTAVTIGGHVFKGILYDQGPES 247 8999************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MAGFSLGGGQ HTQQSHSGEE DEGIPPESLF LYGAGGSAGA GAGAGGRGFE IWQRHQHEIQ 60 QRQQLYAAST GTLLAFGGSG GNEPIVPVSG RSGPAGSSGG LSCQDCGNQA KKDCSHMRCR 120 TCCKSRGLQC PTHVKSTWVP AAKRRERQQH LAAAVGESSA GGGGAENSKR PRELSARFPT 180 LIASTTSGGT AEVGALSFPA EVCSPAVFRC VRVSPVDETE DQFAYQTAVT IGGHVFKGIL 240 YDQGPESSYS PSTPSGAAAA PPTAGTIAAS LIASSTGSFS STSSATAGLL DPSSLYPTPL 300 SSYMTGNQFF PHHPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	2e-53	SRS family protein