PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64135.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

GRF

Protein Properties

Length: 389aa MW: 42353.2 Da PI: 8.0902

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.3	3.1e-24	78	122	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs++++ ++k+CErH+hrgr+rsrk++e+ PKA64135.1 78 DPEPGRCRRTDGKKWRCSKDAYTDSKYCERHMHRGRNRSRKHVES 122 79****************************************986 PP
2	QLQ	63.3	6.4e-22	17	52	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Q+++L++Q+l++KyL+a++PvPpeLl++i++ PKA64135.1 17 PFTASQWEELEHQALIFKYLIAGMPVPPELLLPIRR 52 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MNNAPAAGGT GVGCRPPFTA SQWEELEHQA LIFKYLIAGM PVPPELLLPI RRSYETMTSR 60 FYSHPALGYC TYYGKKLDPE PGRCRRTDGK KWRCSKDAYT DSKYCERHMH RGRNRSRKHV 120 ESPQALSQSQ SSSSSSATTS LSPSAWSSGS GAGSSATPSS AGASGGSFHA FSLQSIASTH 180 QPAVGLGNAG TSYFNMDPSS YGAKDFRSTL LPLIKSVGVN LLGFIRLLVV HHEYIHGSKP 240 GLDGRSIYCE ASGNLRGLGI DSSLDSLGHL MPSPFSTYPA SKVKDGSFIH NSFPQLQPLD 300 DLGQVTISSL PKQQHSIFRN EFGSSEPSVK AEHLLRPFFE EWPSTRDLWS DVEDERSNST 360 TFSTTQLSMS IPMPTSDFST SSCRTPSDD

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MNNAPAAGGT GVGCRPPFTA SQWEELEHQA LIFKYLIAGM PVPPELLLPI RRSYETMTSR  60
FYSHPALGYC TYYGKKLDPE PGRCRRTDGK KWRCSKDAYT DSKYCERHMH RGRNRSRKHV  120
ESPQALSQSQ SSSSSSATTS LSPSAWSSGS GAGSSATPSS AGASGGSFHA FSLQSIASTH  180
QPAVGLGNAG TSYFNMDPSS YGAKDFRSTL LPLIKSVGVN LLGFIRLLVV HHEYIHGSKP  240
GLDGRSIYCE ASGNLRGLGI DSSLDSLGHL MPSPFSTYPA SKVKDGSFIH NSFPQLQPLD  300
DLGQVTISSL PKQQHSIFRN EFGSSEPSVK AEHLLRPFFE EWPSTRDLWS DVEDERSNST  360
TFSTTQLSMS IPMPTSDFST SSCRTPSDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-49	GRF family protein