PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA64049.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 285aa    MW: 32295.8 Da    PI: 5.0728
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA64049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.2e-10256282430
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
         HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                  hn  ErrRRdriN+++  L+el+P++
  PKA64049.1 256 VHNLSERRRRDRINEKMKALQELIPNC 282
                 6************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MNDHSKSFQK KLTGFDWEFA ELLWRNGNPL IHSPSPRRLP ASINEEEEEE EEEEPKDLKN  60
PILNPALEDH EMSPWFQYPS FELLEKELAS DFFCDIPSTA VTESTMPPPK PELPENRSSL  120
NFPHFSRPAK FCINNRTQKE IQSDVSGSSS MITMGSGTGE TNQVATFFDR KSNLCNLSTV  180
SLPPPQRSKE DLETRTETYE ATGTSSSGGS VLNVHGNKRK GREVDEAGSM SEEGDYESAD  240
GKKPAQRYRR SRAAEVHNLS ERRRRDRINE KMKALQELIP NCTKV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1261266ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.28e-21bHLH family protein