PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64039.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 675aa MW: 75455 Da PI: 5.6503

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.6	1.2e-09	469	506	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe n+yp+ +e+ LA+++gLt +qV++WF N R + PKA64039.1 469 FEHflNPYPKDSEKLMLARQTGLTRSQVSNWFINARVR 506 665569******************************88 PP
2	BELL	112.3	2.6e-36	334	404	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + elq+k akL+++++e+d+rYkqy++q+q+vissF+++ag +akpYt +Al++iSrhFrcL+dai +qi PKA64039.1 334 KLELQNKLAKLMEMMDELDRRYKQYYHQMQIVISSFDVIAGPAAAKPYTIVALQTISRHFRCLRDAINSQI 404 669******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MLSCQYDEMW KDDFASFVNI LFPSRDDFSR RIGHGFPSPC SPRGAQRNPF SLFSSLSAAS 60 SSSSSSDSID AGLDFFEPRK KAMTIFYSSS VNQEEIMPNL YPRDSSRGMY PDIQIPGNTL 120 YFDHPSSAPC TMNSHESAAE APNLMAPIFV ESAHDVWKEG RNEMLLMQTV GGSTNDDSNL 180 GILNGQNFSL QPSNGSATHG KGLSLSLGTQ SSVPTFHYLP ASADISFSVT NQSTSRNDGS 240 YKDNLPIKHA HMNSPQYGVA YFSSSTMNSK YLKAVQELLD EVVNVRKALK QKMEKSQNLA 300 NASGITDGKD GDRGSKSNEV ALNSQDKELS ASEKLELQNK LAKLMEMMDE LDRRYKQYYH 360 QMQIVISSFD VIAGPAAAKP YTIVALQTIS RHFRCLRDAI NSQIDLTRKK LGEQDQNGDS 420 VRLSRLRYID QQLRQQQVMQ QYGTMQPHAW RPQRGLPENS VSILRAWLFE HFLNPYPKDS 480 EKLMLARQTG LTRSQVSNWF INARVRLWKP MIEEMYKEEF IDNDMDSKSS SDNQLKAEDD 540 RRNSIDGEEP QGSEAETGKI SHFNEPTESN PITEQMMDQR SSGDDCSLIS PNLTNLDNGT 600 GRIMAYQMAG LGQYGTGLVS LTLGLQQWGS TLRGTDAYSS NPPPLGVNVG TYDYSNLGDR 660 QNRFGSLHFM QDFAP

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MLSCQYDEMW KDDFASFVNI LFPSRDDFSR RIGHGFPSPC SPRGAQRNPF SLFSSLSAAS  60
SSSSSSDSID AGLDFFEPRK KAMTIFYSSS VNQEEIMPNL YPRDSSRGMY PDIQIPGNTL  120
YFDHPSSAPC TMNSHESAAE APNLMAPIFV ESAHDVWKEG RNEMLLMQTV GGSTNDDSNL  180
GILNGQNFSL QPSNGSATHG KGLSLSLGTQ SSVPTFHYLP ASADISFSVT NQSTSRNDGS  240
YKDNLPIKHA HMNSPQYGVA YFSSSTMNSK YLKAVQELLD EVVNVRKALK QKMEKSQNLA  300
NASGITDGKD GDRGSKSNEV ALNSQDKELS ASEKLELQNK LAKLMEMMDE LDRRYKQYYH  360
QMQIVISSFD VIAGPAAAKP YTIVALQTIS RHFRCLRDAI NSQIDLTRKK LGEQDQNGDS  420
VRLSRLRYID QQLRQQQVMQ QYGTMQPHAW RPQRGLPENS VSILRAWLFE HFLNPYPKDS  480
EKLMLARQTG LTRSQVSNWF INARVRLWKP MIEEMYKEEF IDNDMDSKSS SDNQLKAEDD  540
RRNSIDGEEP QGSEAETGKI SHFNEPTESN PITEQMMDQR SSGDDCSLIS PNLTNLDNGT  600
GRIMAYQMAG LGQYGTGLVS LTLGLQQWGS TLRGTDAYSS NPPPLGVNVG TYDYSNLGDR  660
QNRFGSLHFM QDFAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-105	TALE family protein