PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63896.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 283aa    MW: 32108.2 Da    PI: 6.4003
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-081361582346
                      -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  23 tWktIartmgkgRtlkqcksrwqk 46 
                      +W+ Ia+ ++ gRt++++k++w++
       PKA63896.1 136 RWSQIASQLP-GRTDNEIKNYWNS 158
                      7*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MRFLGGQNRE TRNGTSLANN VIQSRLNFAL KIIGKEFGVI EVAAKEGDIR NQKLRKGLWS  60
PEEDEKLCNH IIINGVTCWS SVPRLAGISP SLIPSHSYLL LLRSDDHQLI NARNSLRIAE  120
VWEELQAQYF FGSLNRWSQI ASQLPGRTDN EIKNYWNSCI KKKLRQKGID PSTHKPLPEN  180
SPSNPVFDPF PAVKLWEETD VKPSNLGFDF DSVSILSSGF SERDSASCSS NWSSSSNLEM  240
LVTTYNMSSL QNLEEHHFHR NMSLIEPVSR GSMEFCFEFD DLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.12e-37MYB family protein