PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63769.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 450aa    MW: 48601.2 Da    PI: 4.4065
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63769.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS223.11.4e-681154351328
        GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                 l++lL+++Aea+  g++   la+ +L rl+e++s  ++ ++Rlaa+fteAL++ l +          +  +       +  +l++f+ +sP+  f++lt
  PKA63769.1 115 LIHLLTAAAEAIFRGEKGhdLARVILVRLREMVSAGASGFERLAAHFTEALQNLLDG----------A--A------PAGEVLTAFHVMSPCASFGQLT 195
                 689*********98654333************************************9..........1..2......22345566999*********** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                 aNqaIl+av+ge+rvHiiD+dis G+QW++L+qaL sR+     +pp+lRiT++ + + +   +++e+g+rL +fA+++++pf+f++   +r   +e+ 
  PKA63769.1 196 ANQAILDAVSGEQRVHIIDYDISDGVQWATLIQALISREdgapPPPPHLRITAITDWRGSLVSSVQEVGRRLLSFAASVNLPFSFEICQLNRSGRFEPA 294
                 ***************************************65444488*********88889**************************9999******** PP

        GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseerikvEr 287
                 + ++ +gEa++ n++l+  +   + +s+ s    +L    s+ +++v+vve+e   ++e     F +rf e l+ y+a+ +slea++ +e + r++vE+
  PKA63769.1 295 AVKIVKGEAVVLNCILHQGNWTPSAASVGS----FLAGAGSVGARLVTVVEEERTSGKEgeedGFPARFREELRRYMAIWESLEAGFQAEGSVRVVVEK 389
                 ****************88888755555555....*******************66654444559*********************************** PP

        GRAS 288 ellgreivnvvacegaerrerhetlek.....WrerleeaGFkpvp 328
                 ++lg++i  ++      r+ ++e+ e+     W e++++a F+ + 
  PKA63769.1 390 QILGPRIAGALRRTCGGRKGDCEEQEEapagwWTEWMTAAEFGMAX 435
                 ***********766555554444433222233**********8765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MEFQTDDIDQ LFFRAAAGSS TASTTTGDEL SWNSWSPDID WEQVSGDVDD LHRLISSGSA  60
LWDNTNSFTT GAVTVDEGDS FSSDTTSSGG ASSKEKNDTA AAAGGGGENE NQLRLIHLLT  120
AAAEAIFRGE KGHDLARVIL VRLREMVSAG ASGFERLAAH FTEALQNLLD GAAPAGEVLT  180
AFHVMSPCAS FGQLTANQAI LDAVSGEQRV HIIDYDISDG VQWATLIQAL ISREDGAPPP  240
PPHLRITAIT DWRGSLVSSV QEVGRRLLSF AASVNLPFSF EICQLNRSGR FEPAAVKIVK  300
GEAVVLNCIL HQGNWTPSAA SVGSFLAGAG SVGARLVTVV EEERTSGKEG EEDGFPARFR  360
EELRRYMAIW ESLEAGFQAE GSVRVVVEKQ ILGPRIAGAL RRTCGGRKGD CEEQEEAPAG  420
WWTEWMTAAE FGMAXXXXYI YIYIYIYMYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-70GRAS family protein