PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63768.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 447aa    MW: 47977.7 Da    PI: 4.5449
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS229.61.4e-7015243786373
        GRAS  86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                  +sP+  f++ltaNqaIl+av+ge+rvHiiD+dis G+QW++L+qaL sR+     +pp+lRiT++ + + +   +++e+g+rL +fA+++++pf+f++
  PKA63768.1 152 SMSPCASFGQLTANQAILDAVSGEQRVHIIDYDISDGVQWATLIQALISREdgapPPPPHLRITAITDWRGSLVSSVQEVGRRLLSFAASVNLPFSFEI 250
                 59*************************************************65444488*********88889************************** PP

        GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleakl 275
                    +r   +e+ + ++ +gEa++ n++l+  +   + +s+ s    +L    s+ +++v+vve+e   ++e     F +rf e l+ y+a+ +slea++
  PKA63768.1 251 CQLNRSGRFEPAAVKIVKGEAVVLNCILHQGNWTPSAASVGS----FLAGAGSVGARLVTVVEEERTSGKEgeedGFPARFREELRRYMAIWESLEAGF 345
                 9999************************88888755555555....*******************66654444559*********************** PP

        GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaW 373
                  +e + r++vE+++lg++i  ++  ++      +  ++ W e++++a F+ + ls ++ +qa+lll  ++ +g+ v+++  + +vl Wk+ +L+s+SaW
  PKA63768.1 346 QAEGSVRVVVEKQILGPRIAGALRRQE------EAPAGWWTEWMTAAEFGMAGLSFFNLCQARLLLGLFA-EGFCVQQDaPNKIVLSWKSSRLLSASAW 437
                 *******************87775555......5599*********************************.9*****88357788************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    
MEFQTDDIDQ LFFGAAAGSS TASTTTGDEL SWNSWSPDID WEQVSGDVDD LHRLISSGSA  60
LWDNTNSFTT GAVTVDEGDS FSSDTTSSGG ASSKEKNDTA AAAGGGGENE NQLRLIHLLT  120
AAAEAIFRGE KGHDLARVIL VRLREMVSAG ASMSPCASFG QLTANQAILD AVSGEQRVHI  180
IDYDISDGVQ WATLIQALIS REDGAPPPPP HLRITAITDW RGSLVSSVQE VGRRLLSFAA  240
SVNLPFSFEI CQLNRSGRFE PAAVKIVKGE AVVLNCILHQ GNWTPSAASV GSFLAGAGSV  300
GARLVTVVEE ERTSGKEGEE DGFPARFREE LRRYMAIWES LEAGFQAEGS VRVVVEKQIL  360
GPRIAGALRR QEEAPAGWWT EWMTAAEFGM AGLSFFNLCQ ARLLLGLFAE GFCVQQDAPN  420
KIVLSWKSSR LLSASAWIPP PPASRRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.13e-73GRAS family protein