PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA63739.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 627aa MW: 67207.4 Da PI: 5.1748 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 455.1 | 4.3e-139 | 240 | 610 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 lv+ L++cAeav++++ ++a+ +L+++s l ++g +m+++a yf+eALa+r++r l+p+++ + +s+ + + f+e +P+lkf+h+taN PKA63739.1 240 LVHGLMACAEAVQQENYKAADVILKQISMLTPSQGGAMRKVAGYFAEALARRIYR--------LNPQQDCSLDSAFSDILQMHFYESCPYLKFAHFTAN 330 6899***************************************************........88888886666666666667**************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 qaIlea++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpps+R+Tg+g+p+++++++l+++g++La++A++++v+fe++ +va++l+dle+ +L+ +p PKA63739.1 331 QAILEAFAGCRRVHVIDFGMKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPDNTDALQQVGWKLAQLADTIHVDFEYRGFVANSLADLEPYMLESSP 429 ***********************************************************************************************9999 PP GRAS 199 ........gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289 E++a+n+v+++hrll+++++l++ vL +v+ ++P++v++veqea+hn+++Flerf+eal+yys++fdsle + + e+++++++++++ PKA63739.1 430 aenggsyePEVVAINSVFEIHRLLSRPGALDK----VLATVRAVKPRIVTIVEQEANHNASPFLERFTEALHYYSTMFDSLEGGCSGEAQQDHMMSEVY 524 999999999***************88888888....*************************************************************** PP GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 lgr+i+n+v+ceg er+erhetl++Wr rl aGF+pv+l+ +a kqa++ll+ ++ +dgyrvee++g+l lgW++rpL+++SaWr PKA63739.1 525 LGRQICNIVSCEGPERTERHETLGQWRGRLAGAGFEPVHLGFNAFKQASMLLALFAgGDGYRVEEKEGCLSLGWHTRPLIATSAWR 610 *************************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 627 aa Download sequence |
MKRDRGESGG GGAIGNYPPA AVKGKMMGME EDSDAGIDEL LAALGYKVRS SDMADVAQKL 60 EQLEMAIGSS AAPDDSLLTH LASDTGHYNP SDLSNWLESM LSEVNLPPPN ESGGFDLHST 120 SAFFDPADNL ATTDSSTLTS VNFSGPPARI LPHDYAHQPV NGGNNRVAYA SERQLGGGST 180 ERKRMRALSS SSSTRGGSGG GAPVSAPKGV ASGQSSACGT EASSAIPVVM LDTQEAGIRL 240 VHGLMACAEA VQQENYKAAD VILKQISMLT PSQGGAMRKV AGYFAEALAR RIYRLNPQQD 300 CSLDSAFSDI LQMHFYESCP YLKFAHFTAN QAILEAFAGC RRVHVIDFGM KQGMQWPALM 360 QALALRPGGP PSFRLTGIGP PQPDNTDALQ QVGWKLAQLA DTIHVDFEYR GFVANSLADL 420 EPYMLESSPA ENGGSYEPEV VAINSVFEIH RLLSRPGALD KVLATVRAVK PRIVTIVEQE 480 ANHNASPFLE RFTEALHYYS TMFDSLEGGC SGEAQQDHMM SEVYLGRQIC NIVSCEGPER 540 TERHETLGQW RGRLAGAGFE PVHLGFNAFK QASMLLALFA GGDGYRVEEK EGCLSLGWHT 600 RPLIATSAWR VAGSSSSTES LSSGDAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 0.0 | GRAS family protein |