PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63646.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 292aa    MW: 31782.1 Da    PI: 8.3803
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.15.7e-19156189134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs C ttkTplWR+gp+g+k+LCnaCG+++rk +
  PKA63646.1 156 CSDCSTTKTPLWRSGPRGPKSLCNACGIRQRKAR 189
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MTPLCHMKQI PNTTFVGGEQ HQSCVPFLSL GTTSPSSITV APSLPFDHFQ AHDHTASDTY  60
NLLHPQEEIG KESCYFRNYL ADHSSCCDQY ERDGGGSHGS AVKWMSSKMR IMRKMMSSDE  120
HRRISKSRRA NQQAAVEEQK LQVGNEMIHG GIVRVCSDCS TTKTPLWRSG PRGPKSLCNA  180
CGIRQRKARR AMAAAAAAAA AAAVNCGILP ATAGKTPEKD NTSGTADRTV PFKKRCRFAS  240
ADDQTAPEKL GFEDMVVSMN KKSSSFQDVF PEEEKDAAIL LMALSCGLIC SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.14e-26GATA family protein