PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63086.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family HB-other
Protein Properties Length: 315aa    MW: 35716.7 Da    PI: 8.7124
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox22.12.6e-0711562156
                HSSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS
    Homeobox 21 knrypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56
                +n +p ++++  LA+k            ++ +qV +WFqNrR+ ++
  PKA63086.1 11 NNTTPARDMICALAEKFsaspdrtgkiVVQPKQVWNWFQNRRYSQR 56
                57889999999999999999999998899**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEMEVCLQGL NNTTPARDMI CALAEKFSAS PDRTGKIVVQ PKQVWNWFQN RRYSQRSKVK  60
PSGKLIVAPV SRGDSSAQLR NVHHPVSVPQ DLKNAGQISF ESTRLEFEAK SARDGAWYDV  120
LAFLSHRMAK TNDPEVQVRF SGLGVEEDEW IDVRKCVRQR SLPCESVECI AVLPGDLILC  180
FQEGKEQALY FDAHVLDAQR RRHDIRGCRC RFLVRYDHDQ SEEIVPLRKV CRRPETDCRL  240
LQHRASRASS SAHPSVSSQA GMLRDQTLRP QRVRKSHKLI DANNEELTTI ALPALSRLKD  300
PAAIKTESAA TTMEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.12e-98HB-other family protein