PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA62650.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | Dof | ||||||||
Protein Properties | Length: 250aa MW: 27056.1 Da PI: 8.7666 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 127.5 | 4e-40 | 40 | 101 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+alkcprCds+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rk k+sss PKA62650.1 40 PEQALKCPRCDSANTKFCYYNNYSLTQPRYFCKGCRRYWTKGGTLRNVPVGGGCRKTKRSSS 101 6899******************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MEVASAQQQI LTTTHGMEEI LGGSRNLPPA PDKKPRPPPP EQALKCPRCD SANTKFCYYN 60 NYSLTQPRYF CKGCRRYWTK GGTLRNVPVG GGCRKTKRSS SSSPSSATSP SNSASSSRRS 120 HDPQSIISAA TMQLPPMPSF SYDPFLLGNP NPNPNPNPGS FHGGFLDIMR SGIYENKLPF 180 YFGYGGDGAE ADRRTTTNTT SDLDSGAAII NGDGSFPMDQ LAERDYWNGM GSSSSSSPPP 240 PWQIINSSLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 2e-32 | Dof family protein |