PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62494.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Nin-like
Protein Properties Length: 299aa    MW: 32802.9 Da    PI: 8.5942
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK63.73e-203780649
      RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                s+ed++k+Fs pi++AA+ Lgv+ +vLKriCRq+G+ RWP+Rk+
  PKA62494.1 37 SFEDVAKFFSIPIAEAASVLGVSDSVLKRICRQNGVLRWPYRKV 80
                799****************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MSSTSGAEPS GQQSLDQRKP DCWSSAAPAP PRNGKPSFED VAKFFSIPIA EAASVLGVSD  60
SVLKRICRQN GVLRWPYRKV LAGKTVEDIK KDAASEKTKE LDELPNLAKD KVDFSKFVTF  120
TSALSPTNSG NHCEKSAPAL VQDTYKLQQG VSMAGQALQV QANKFMQYGL SALPQPIQPK  180
NISTFMDEFQ YGFPSKGLSS VSVKWWGDSR GEGTKDTDKI HVIDDESNRD PKDISVVDEP  240
SASLCSLRKR SVENGREALE VGISEGWSSY GLTKKQRLLL SKVFKSSPRD HLTDNFANH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.15e-11Nin-like family protein