PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62411.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 555aa MW: 60125.8 Da PI: 6.5124

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.8	8.3e-32	191	248	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsY++Ct+++Cpvkkkvers+ ++ ++ei+Y+g H h+k PKA62411.1 191 EDGYNWRKYGQKQVKGSEYPRSYFKCTHPNCPVKKKVERSQ-EGLITEIIYKGVHSHPK 248 8**************************************.*************85 PP
2	WRKY	100.9	7.5e-32	375	433	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct ++C+v+k+ver+++d k v++ Yeg+Hnh+ PKA62411.1 375 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPKCTVRKHVERASHDLKSVITSYEGKHNHD 433 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MNSVNDPKPS SRSGLSVRVA ARAGFSDLMI ETAQIRSRTV SSSEKTGVPS PLLTIPPGLS 60 PTMLLDSPFL ASKSVAEPSP ITSKFPFTEG DNDMESVLAN ENNDHPLQQT GPPSFALKHP 120 LGYSSGAENN PALHMNGIHL QHGFSQPYEE NGNFRSEMLD KRASKLTLDE SQDEIGSKGE 180 HSSTSLGAPA EDGYNWRKYG QKQVKGSEYP RSYFKCTHPN CPVKKKVERS QEGLITEIIY 240 KGVHSHPKPA LNRELSGAAT ADSKNDATDA DQSASIAVEQ CDQSNNNMQD QEGLCREAPD 300 GLGASSTLSN DDDADELATL RSVSLGGDDD CDGDGGETES KRRKLVACAL EISSASKAAR 360 EPRVVVQTTS DVDILDDGYR WRKYGQKVVK GNPNPRSYYK CTNPKCTVRK HVERASHDLK 420 SVITSYEGKH NHDVPAARTS NQTSSTSLST STNTSAPPTI LLQQNAELAR MADSSPLLSY 480 GVPSRDQPLG VIPLAGLGNI PTMKMPVLPP FPAYMAQHHQ NRGTGFMMPN GRPKEEPSSD 540 PTTQLAVHQL FINQR

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MNSVNDPKPS SRSGLSVRVA ARAGFSDLMI ETAQIRSRTV SSSEKTGVPS PLLTIPPGLS  60
PTMLLDSPFL ASKSVAEPSP ITSKFPFTEG DNDMESVLAN ENNDHPLQQT GPPSFALKHP  120
LGYSSGAENN PALHMNGIHL QHGFSQPYEE NGNFRSEMLD KRASKLTLDE SQDEIGSKGE  180
HSSTSLGAPA EDGYNWRKYG QKQVKGSEYP RSYFKCTHPN CPVKKKVERS QEGLITEIIY  240
KGVHSHPKPA LNRELSGAAT ADSKNDATDA DQSASIAVEQ CDQSNNNMQD QEGLCREAPD  300
GLGASSTLSN DDDADELATL RSVSLGGDDD CDGDGGETES KRRKLVACAL EISSASKAAR  360
EPRVVVQTTS DVDILDDGYR WRKYGQKVVK GNPNPRSYYK CTNPKCTVRK HVERASHDLK  420
SVITSYEGKH NHDVPAARTS NQTSSTSLST STNTSAPPTI LLQQNAELAR MADSSPLLSY  480
GVPSRDQPLG VIPLAGLGNI PTMKMPVLPP FPAYMAQHHQ NRGTGFMMPN GRPKEEPSSD  540
PTTQLAVHQL FINQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-119	WRKY family protein