PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62319.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 928aa MW: 102352 Da PI: 9.3453

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.1	1.4e-08	863	895	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+++e+++LA+ +gL+++q+ +WF N+R ++ PKA62319.1 863 PYPTEDEKARLAEITGLDQKQINNWFINQRKRH 895 8*****************************885 PP
2	ELK	36.4	1.1e-12	815	836	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL+sL++EFs PKA62319.1 815 ELKDMLLKKYSGYLCSLRKEFS 836 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 928 aa Download sequence
MSIIYRLIMG SRSHSPRSFT LLSLLPVLHG SRRRPTSTPI TAGLVSHLHQ KGSSALCRRG 60 ILERVSSLHQ REAYRVSPVR HSPDRELRRS PTADSSPFSL RCLRCFSSPF SLNPYSSSFA 120 FGLCFKSFTS LAREKVLSAS PTHNGSTRSN VCHHGIELPH LIPSGEHRVE KFDIQLVDPD 180 LWRVTFGVSY SSSGMEDRLE KSSDYCEEDA NEYGITHDDS VVGESLDFDA IDDLRVQKQL 240 FYKLDKGSKE YEECSFRFHR KKSSKKKHEK QSQRKLVEEC KKIKFSDAKP FSGCPKGKVK 300 HRPSVLKTLD TVMNKEVTSM VAKKVRTPTF NQLTDPYHLP FCLDIFITKG SVRACVIHRV 360 TSKVVAVAHS ISKDMKFDLT SKKDATACAA VGEILAQRAM EDDIHNMVYT PRKGDKIEGK 420 LQVVLQSIID HGVNVKSVAR VRGKAKGTVV LLRNARRCAV PEGSPSPSSS PADSRHVAES 480 HVHLNDDGMC IQNCRPSGRV GPGPFVCMVG ATVGAKEMLV RICKLETTRL LPSRLPLAPR 540 QHVRPSPLVR CILFLASLSH AFCSFRIRCS RALGVEGSVG AAASLPLRRR GGFLPDFSVL 600 TLHLFLFCVA DIRFSYLRVC AREAKGRRER EREMGDLYSI HPGIARASMV AAAGEVAAGC 660 CGETWFNDGE AASAADAAGT GRSVVDLPDL IKARIACHPH YPALLSAFIE CRKETYCRVL 720 LRYKDELSKP FNDASSFLNS VEAELRELCK ASTAASSSSS SAASASAAAG GCATGAGSIT 780 SASDDALGSS DEEPSHGNAN ASESHDSNAG VQHHELKDML LKKYSGYLCS LRKEFSKKRK 840 VGKLPKDARS TLLEWWNSHY RWPYPTEDEK ARLAEITGLD QKQINNWFIN QRKRHWKPSE 900 DMQYALMEGV SGGSSGTTLC FETGTIGH

Sequence ? help Back to Top

Protein Sequence Length: 928 aa Download sequence

MSIIYRLIMG SRSHSPRSFT LLSLLPVLHG SRRRPTSTPI TAGLVSHLHQ KGSSALCRRG  60
ILERVSSLHQ REAYRVSPVR HSPDRELRRS PTADSSPFSL RCLRCFSSPF SLNPYSSSFA  120
FGLCFKSFTS LAREKVLSAS PTHNGSTRSN VCHHGIELPH LIPSGEHRVE KFDIQLVDPD  180
LWRVTFGVSY SSSGMEDRLE KSSDYCEEDA NEYGITHDDS VVGESLDFDA IDDLRVQKQL  240
FYKLDKGSKE YEECSFRFHR KKSSKKKHEK QSQRKLVEEC KKIKFSDAKP FSGCPKGKVK  300
HRPSVLKTLD TVMNKEVTSM VAKKVRTPTF NQLTDPYHLP FCLDIFITKG SVRACVIHRV  360
TSKVVAVAHS ISKDMKFDLT SKKDATACAA VGEILAQRAM EDDIHNMVYT PRKGDKIEGK  420
LQVVLQSIID HGVNVKSVAR VRGKAKGTVV LLRNARRCAV PEGSPSPSSS PADSRHVAES  480
HVHLNDDGMC IQNCRPSGRV GPGPFVCMVG ATVGAKEMLV RICKLETTRL LPSRLPLAPR  540
QHVRPSPLVR CILFLASLSH AFCSFRIRCS RALGVEGSVG AAASLPLRRR GGFLPDFSVL  600
TLHLFLFCVA DIRFSYLRVC AREAKGRRER EREMGDLYSI HPGIARASMV AAAGEVAAGC  660
CGETWFNDGE AASAADAAGT GRSVVDLPDL IKARIACHPH YPALLSAFIE CRKETYCRVL  720
LRYKDELSKP FNDASSFLNS VEAELRELCK ASTAASSSSS SAASASAAAG GCATGAGSIT  780
SASDDALGSS DEEPSHGNAN ASESHDSNAG VQHHELKDML LKKYSGYLCS LRKEFSKKRK  840
VGKLPKDARS TLLEWWNSHY RWPYPTEDEK ARLAEITGLD QKQINNWFIN QRKRHWKPSE  900
DMQYALMEGV SGGSSGTTLC FETGTIGH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	831	840	LRKEFSKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-57	TALE family protein