PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA62314.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | bHLH | ||||||||
Protein Properties | Length: 194aa MW: 21212.3 Da PI: 11.8584 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.4 | 0.00029 | 128 | 164 | 13 | 54 |
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +N + + L +l+P + +Kls ++ Le+A +YI L PKA62314.1 128 RTVLNGKAAVLGRLVPGC-----RKLSLSTLLEEASDYIAAL 164 566777888899999998.....8***************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MALSDADGDS AAKEGDRKRK RSEVVWRPPM EKWRTVSEQK TYSSKLLLAL RHVRSYAPAA 60 DLAPRSRAVR EAADRALAVA ARGRTRWSRA ILSHRKRRQR WPRSAAPSSA GPRFTGECSR 120 SSAKKKSRTV LNGKAAVLGR LVPGCRKLSL STLLEEASDY IAALEMQVRA MSTLTAILSA 180 AGGSSSPQSE RITP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06590.2 | 3e-23 | bHLH family protein |